E06
Johnson Controls
Heating Output Relay Failure
Thermostat shows E06 and will not energize heating outputs; heat calls may be ignored.
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Safety Warning
This repair may involve working with high voltage components or water connections. Always unplug the appliance before removing any panels.
If you are not confident in your ability to perform this repair safely, we strongly recommend contacting a professional technician.
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Possible Causes
Failed heat relay on main control board, Burned relay contacts from high current, Miswired W/W1/W2 terminals, Shorted heating control circuit
How to Fix / Troubleshooting
Safety: This involves control wiring to heating equipment. Turn off power to the furnace/air handler and thermostat at the breaker before proceeding.
- Step 1 – Check wiring: Remove the thermostat and verify that W/W1/W2 wires are correctly landed and not touching adjacent terminals. Tighten all screws.
- Step 2 – Inspect for shorts: At the furnace control board, inspect the thermostat cable. Look for crushed or pinched sections where conductors may short to ground or each other.
- Step 3 – Test output: With power restored and E06 present, call for heat and measure voltage between R and W/W1 at the thermostat. If the thermostat does not send 24 VAC when calling for heat, the internal relay is likely failed.
- Step 4 – Bypass test (advanced): With power off, temporarily jumper R to W/W1 at the furnace control board to confirm the furnace itself operates. Remove jumper after test.
- Step 5 – Replace thermostat: If the furnace responds to a jumper but not to the thermostat, replace the thermostat main control board or entire thermostat.
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Repair Difficulty
Hard
4/5
Required Part
Main Control Board (Heat Relay)
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